WarpX
PlasmaInjector.H
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1 /* Copyright 2019 Andrew Myers, Axel Huebl, David Grote
2  * Maxence Thevenet, Remi Lehe, Weiqun Zhang
3  *
4  *
5  * This file is part of WarpX.
6  *
7  * License: BSD-3-Clause-LBNL
8  */
9 #ifndef PLASMA_INJECTOR_H_
10 #define PLASMA_INJECTOR_H_
11 
12 #include "InjectorDensity.H"
13 #include "InjectorFlux.H"
14 #include "InjectorMomentum.H"
15 #include "TemperatureProperties.H"
16 #include "VelocityProperties.H"
18 
19 #include "InjectorPosition_fwd.H"
20 
21 #include <AMReX_Dim3.H>
22 #include <AMReX_REAL.H>
23 #include <AMReX_Vector.H>
24 
25 #include <AMReX_BaseFwd.H>
26 
27 #ifdef WARPX_USE_OPENPMD
28 # include <openPMD/openPMD.hpp>
29 #endif
30 
31 #include <limits>
32 #include <memory>
33 #include <string>
34 
41 {
42 
43 public:
44 
45  PlasmaInjector () = default;
46 
47  PlasmaInjector (int ispecies, const std::string& name, const amrex::Geometry& geom);
48 
50 
51  // bool: whether the point (x, y, z) is inside the plasma region
52  bool insideBounds (amrex::Real x, amrex::Real y, amrex::Real z) const noexcept;
53 
54  // bool: whether the region defined by lo and hi overlaps with the plasma region
55  bool overlapsWith (const amrex::XDim3& lo, const amrex::XDim3& hi) const noexcept;
56 
59 
61 
62  // gamma * beta
63  amrex::XDim3 getMomentum (amrex::Real x, amrex::Real y, amrex::Real z) const noexcept;
64 
65  amrex::Real getCharge () {return charge;}
66  amrex::Real getMass () {return mass;}
68 
69  // bool: whether the initial injection of particles should be done
70  // This routine is called during initialization of the plasma. When injecting
71  // a surface flux, no injection is done doing initialization so return false.
72  bool doInjection () const noexcept { return h_inj_pos != nullptr && !surface_flux;}
73 
74  bool add_single_particle = false;
77  amrex::ParticleReal single_particle_weight;
78 
79  bool add_multiple_particles = false;
87 
88  bool gaussian_beam = false;
89  amrex::Real x_m;
90  amrex::Real y_m;
91  amrex::Real z_m;
92  amrex::Real x_rms;
93  amrex::Real y_rms;
94  amrex::Real z_rms;
95  amrex::Real x_cut = std::numeric_limits<amrex::Real>::max();
96  amrex::Real y_cut = std::numeric_limits<amrex::Real>::max();
97  amrex::Real z_cut = std::numeric_limits<amrex::Real>::max();
98  amrex::Real q_tot = 0.0;
99  long npart;
100  int do_symmetrize = 0;
102 
103  bool external_file = false;
104  amrex::Real z_shift = 0.0;
105 #ifdef WARPX_USE_OPENPMD
107  std::unique_ptr<openPMD::Series> m_openpmd_input_series;
108 #endif
109 
110  bool surface_flux = false; // inject from a surface
111  amrex::Real surface_flux_pos; // surface location
112  amrex::Real flux_tmin = -1.; // Time after which we start injecting particles
113  amrex::Real flux_tmax = -1.; // Time after which we stop injecting particles
114  // Flux normal axis represents the direction in which to emit particles
115  // When compiled in Cartesian geometry, 0 = x, 1 = y, 2 = z
116  // When compiled in cylindrical geometry, 0 = radial, 1 = azimuthal, 2 = z
118  int flux_direction; // -1 for left, +1 for right
119 
120  bool radially_weighted = true;
121 
122  std::string str_density_function;
123  std::string str_flux_function;
127 
128  amrex::Real xmin, xmax;
129  amrex::Real ymin, ymax;
130  amrex::Real zmin, zmax;
131  amrex::Real density_min = std::numeric_limits<amrex::Real>::epsilon();
132  amrex::Real density_max = std::numeric_limits<amrex::Real>::max();
133 
136 
140 
141 protected:
142 
143  amrex::Real mass, charge;
144 
146 
147  amrex::Real density;
148  amrex::Real flux;
149 
151  std::string species_name;
152 
153  std::unique_ptr<InjectorPosition> h_inj_pos;
155 
156  std::unique_ptr<InjectorDensity,InjectorDensityDeleter> h_inj_rho;
158  std::unique_ptr<amrex::Parser> density_parser;
159 
160  std::unique_ptr<InjectorFlux,InjectorFluxDeleter> h_inj_flux;
162  std::unique_ptr<amrex::Parser> flux_parser;
163 
164  std::unique_ptr<InjectorMomentum,InjectorMomentumDeleter> h_inj_mom;
166  std::unique_ptr<amrex::Parser> ux_parser;
167  std::unique_ptr<amrex::Parser> uy_parser;
168  std::unique_ptr<amrex::Parser> uz_parser;
169 
170  // Keep a pointer to TemperatureProperties to ensure the lifetime of the
171  // contained Parser
172  std::unique_ptr<TemperatureProperties> h_mom_temp;
173  std::unique_ptr<VelocityProperties> h_mom_vel;
174 
175  void parseDensity (const amrex::ParmParse& pp);
176  void parseFlux (const amrex::ParmParse& pp);
177  void parseMomentum (const amrex::ParmParse& pp);
178 };
179 
180 #endif
PhysicalSpecies
Definition: SpeciesPhysicalProperties.H:16
Definition: PlasmaInjector.H:41
bool insideBounds(amrex::Real x, amrex::Real y, amrex::Real z) const noexcept
Definition: PlasmaInjector.cpp:744
InjectorPosition * d_inj_pos
Definition: PlasmaInjector.H:154
std::unique_ptr< InjectorDensity, InjectorDensityDeleter > h_inj_rho
Definition: PlasmaInjector.H:156
PhysicalSpecies getPhysicalSpecies() const
Definition: PlasmaInjector.H:67
std::string str_momentum_function_uy
Definition: PlasmaInjector.H:125
std::string str_flux_function
Definition: PlasmaInjector.H:123
amrex::Vector< amrex::ParticleReal > multiple_particles_weight
Definition: PlasmaInjector.H:86
std::unique_ptr< InjectorMomentum, InjectorMomentumDeleter > h_inj_mom
Definition: PlasmaInjector.H:164
amrex::Real x_rms
Definition: PlasmaInjector.H:92
amrex::Vector< amrex::ParticleReal > multiple_particles_ux
Definition: PlasmaInjector.H:83
amrex::Real z_rms
Definition: PlasmaInjector.H:94
InjectorDensity * d_inj_rho
Definition: PlasmaInjector.H:157
long npart
Definition: PlasmaInjector.H:99
amrex::Real x_m
Definition: PlasmaInjector.H:89
PlasmaInjector()=default
amrex::Vector< amrex::ParticleReal > multiple_particles_uy
Definition: PlasmaInjector.H:84
bool radially_weighted
Definition: PlasmaInjector.H:120
amrex::Vector< amrex::ParticleReal > multiple_particles_uz
Definition: PlasmaInjector.H:85
amrex::Real x_cut
Definition: PlasmaInjector.H:95
InjectorPosition * getInjectorPosition()
Definition: PlasmaInjector.cpp:760
amrex::Vector< amrex::ParticleReal > multiple_particles_pos_x
Definition: PlasmaInjector.H:80
bool overlapsWith(const amrex::XDim3 &lo, const amrex::XDim3 &hi) const noexcept
Definition: PlasmaInjector.cpp:751
std::string str_density_function
Definition: PlasmaInjector.H:122
std::unique_ptr< amrex::Parser > uz_parser
Definition: PlasmaInjector.H:168
amrex::Real z_cut
Definition: PlasmaInjector.H:97
InjectorFlux * getInjectorFlux()
Definition: PlasmaInjector.cpp:772
amrex::Vector< amrex::ParticleReal > multiple_particles_pos_y
Definition: PlasmaInjector.H:81
InjectorMomentum * getInjectorMomentumDevice()
Definition: PlasmaInjector.cpp:778
void parseMomentum(const amrex::ParmParse &pp)
Definition: PlasmaInjector.cpp:612
amrex::Real q_tot
Definition: PlasmaInjector.H:98
amrex::Real flux_tmin
Definition: PlasmaInjector.H:112
bool add_multiple_particles
Definition: PlasmaInjector.H:79
amrex::XDim3 getMomentum(amrex::Real x, amrex::Real y, amrex::Real z) const noexcept
Definition: PlasmaInjector.cpp:737
amrex::Real flux_tmax
Definition: PlasmaInjector.H:113
std::unique_ptr< InjectorFlux, InjectorFluxDeleter > h_inj_flux
Definition: PlasmaInjector.H:160
amrex::Real xmin
Definition: PlasmaInjector.H:128
std::unique_ptr< amrex::Parser > uy_parser
Definition: PlasmaInjector.H:167
int symmetrization_order
Definition: PlasmaInjector.H:101
InjectorMomentum * getInjectorMomentumHost()
Definition: PlasmaInjector.cpp:784
std::unique_ptr< openPMD::Series > m_openpmd_input_series
additional z offset for particle positions
Definition: PlasmaInjector.H:107
amrex::Real ymax
Definition: PlasmaInjector.H:129
std::string species_name
Definition: PlasmaInjector.H:151
InjectorMomentum * d_inj_mom
Definition: PlasmaInjector.H:165
InjectorDensity * getInjectorDensity()
Definition: PlasmaInjector.cpp:766
amrex::ParticleReal single_particle_weight
Definition: PlasmaInjector.H:77
std::unique_ptr< amrex::Parser > ux_parser
Definition: PlasmaInjector.H:166
bool external_file
Definition: PlasmaInjector.H:103
amrex::Real xmax
Definition: PlasmaInjector.H:128
amrex::Real zmin
Definition: PlasmaInjector.H:130
std::unique_ptr< TemperatureProperties > h_mom_temp
Definition: PlasmaInjector.H:172
std::unique_ptr< amrex::Parser > flux_parser
Definition: PlasmaInjector.H:162
std::string str_momentum_function_uz
Definition: PlasmaInjector.H:126
int do_symmetrize
Definition: PlasmaInjector.H:100
bool surface_flux
Definition: PlasmaInjector.H:110
amrex::Real y_rms
Definition: PlasmaInjector.H:93
amrex::Real ymin
Definition: PlasmaInjector.H:129
amrex::Real density_min
Definition: PlasmaInjector.H:131
amrex::Real density
Definition: PlasmaInjector.H:147
amrex::Vector< int > num_particles_per_cell_each_dim
Definition: PlasmaInjector.H:60
bool add_single_particle
Definition: PlasmaInjector.H:74
int num_particles_per_cell
Definition: PlasmaInjector.H:57
amrex::Real z_shift
initialize from an openPMD file
Definition: PlasmaInjector.H:104
amrex::Vector< amrex::ParticleReal > multiple_particles_pos_z
Definition: PlasmaInjector.H:82
bool gaussian_beam
Definition: PlasmaInjector.H:88
amrex::Real zmax
Definition: PlasmaInjector.H:130
amrex::Real z_m
Definition: PlasmaInjector.H:91
amrex::Real getMass()
Definition: PlasmaInjector.H:66
amrex::Vector< amrex::ParticleReal > single_particle_u
Definition: PlasmaInjector.H:76
PhysicalSpecies physical_species
Definition: PlasmaInjector.H:145
bool doInjection() const noexcept
Definition: PlasmaInjector.H:72
amrex::Real getCharge()
Definition: PlasmaInjector.H:65
InjectorFlux * d_inj_flux
Definition: PlasmaInjector.H:161
void parseFlux(const amrex::ParmParse &pp)
Definition: PlasmaInjector.cpp:585
int flux_direction
Definition: PlasmaInjector.H:118
std::unique_ptr< amrex::Parser > density_parser
Definition: PlasmaInjector.H:158
int species_id
Definition: PlasmaInjector.H:150
amrex::Real density_max
Definition: PlasmaInjector.H:132
amrex::Real charge
Definition: PlasmaInjector.H:143
amrex::Vector< amrex::ParticleReal > single_particle_pos
Definition: PlasmaInjector.H:75
void parseDensity(const amrex::ParmParse &pp)
Definition: PlasmaInjector.cpp:550
amrex::Real mass
Definition: PlasmaInjector.H:143
std::unique_ptr< InjectorPosition > h_inj_pos
Definition: PlasmaInjector.H:153
amrex::Real y_cut
Definition: PlasmaInjector.H:96
amrex::Real num_particles_per_cell_real
Definition: PlasmaInjector.H:58
amrex::Real flux
Definition: PlasmaInjector.H:148
std::unique_ptr< VelocityProperties > h_mom_vel
Definition: PlasmaInjector.H:173
int flux_normal_axis
Definition: PlasmaInjector.H:117
std::string str_momentum_function_ux
Definition: PlasmaInjector.H:124
amrex::Real surface_flux_pos
Definition: PlasmaInjector.H:111
amrex::Real y_m
Definition: PlasmaInjector.H:90
name
Definition: run_automated.py:229
Definition: InjectorDensity.H:127
Definition: InjectorFlux.H:62
Definition: InjectorMomentum.H:518
Definition: InjectorPosition.H:118