1 #ifndef WARPX_DIAGNOSTICS_H_
2 #define WARPX_DIAGNOSTICS_H_
69 virtual void Flush (
int i_buffer,
bool force_flush) = 0;
104 virtual bool DoDump (
int step,
int i_buffer,
bool force_flush=
false) = 0;
121 virtual amrex::Real
gettlab ( [[maybe_unused]]
int i_buffer) {
return 0.;}
126 virtual void settlab ( [[maybe_unused]]
int i_buffer, [[maybe_unused]] amrex::Real tlab) { }
166 virtual void set_flush_counter ( [[maybe_unused]]
int i_buffer, [[maybe_unused]]
int flush_counter) { }
184 virtual void set_snapshot_full ( [[maybe_unused]]
int i_buffer, [[maybe_unused]]
int snapshot_full) { }
base class for diagnostics. Contains main routines to filter, compute and flush diagnostics.
Definition: Diagnostics.H:31
std::vector< bool > m_pfield_do_average
Definition: Diagnostics.H:243
bool BaseReadParameters()
Definition: Diagnostics.cpp:48
void setSnapshotDomainHi(int i_buffer, int idim, amrex::Real domain_lab_hi)
Definition: Diagnostics.H:157
amrex::Vector< std::string > m_varnames_fields
Definition: Diagnostics.H:236
virtual void PrepareFieldDataForOutput()
Definition: Diagnostics.H:213
int nmax_lev
Definition: Diagnostics.H:279
virtual void PrepareBufferData()
Definition: Diagnostics.H:205
Diagnostics(Diagnostics &&)=default
std::string m_format
Definition: Diagnostics.H:258
virtual amrex::Real gettlab([[maybe_unused]] int i_buffer)
Definition: Diagnostics.H:121
virtual void set_last_valid_Zslice([[maybe_unused]] int i_buffer, [[maybe_unused]] int last_valid_Zslice)
Definition: Diagnostics.H:175
virtual int get_snapshot_full_flag([[maybe_unused]] int i_buffer)
Definition: Diagnostics.H:179
void InitDataAfterRestart()
Definition: Diagnostics.cpp:308
std::vector< std::string > m_pfield_strings
Definition: Diagnostics.H:247
amrex::Vector< std::string > m_pfield_varnames
Definition: Diagnostics.H:239
amrex::Vector< std::unique_ptr< ComputeParticleDiagFunctor > > m_all_particle_functors
Definition: Diagnostics.H:310
int m_already_done
Definition: Diagnostics.H:260
amrex::Vector< amrex::RealBox > m_snapshot_domain_lab
Definition: Diagnostics.H:319
virtual void set_snapshot_full([[maybe_unused]] int i_buffer, [[maybe_unused]] int snapshot_full)
Definition: Diagnostics.H:184
void InitData()
Definition: Diagnostics.cpp:377
amrex::Vector< amrex::Vector< amrex::MultiFab > > m_mf_output
Definition: Diagnostics.H:268
amrex::Vector< amrex::Real > m_hi
Definition: Diagnostics.H:302
int m_file_min_digits
Definition: Diagnostics.H:227
virtual void settlab([[maybe_unused]] int i_buffer, [[maybe_unused]] amrex::Real tlab)
Definition: Diagnostics.H:126
std::vector< std::string > m_output_species_names
Definition: Diagnostics.H:283
virtual int get_flush_counter([[maybe_unused]] int i_buffer)
Definition: Diagnostics.H:161
virtual void DerivedInitData()
Definition: Diagnostics.H:199
virtual void MovingWindowAndGalileanDomainShift(int step)
Definition: Diagnostics.H:221
bool DoDumpLastTimestep() const
Definition: Diagnostics.H:115
virtual void InitializeParticleFunctors()
Definition: Diagnostics.H:91
virtual void UpdateBufferData()
Definition: Diagnostics.H:209
std::string m_diag_name
Definition: Diagnostics.H:223
std::unique_ptr< FlushFormat > m_flush_format
Definition: Diagnostics.H:262
amrex::Vector< amrex::Vector< ParticleDiag > > m_output_species
Definition: Diagnostics.H:289
amrex::Vector< amrex::Real > m_lo
Definition: Diagnostics.H:300
amrex::IntVect m_crse_ratio
Definition: Diagnostics.H:298
virtual void set_flush_counter([[maybe_unused]] int i_buffer, [[maybe_unused]] int flush_counter)
Definition: Diagnostics.H:166
amrex::Vector< std::string > m_varnames
Definition: Diagnostics.H:234
virtual void InitializeBufferData(int i_buffer, int lev, bool restart=false)=0
virtual void InitializeFieldFunctorsRZopenPMD([[maybe_unused]] int lev)
Definition: Diagnostics.H:89
virtual void set_buffer_k_index_hi([[maybe_unused]] int i_buffer, [[maybe_unused]] int kindex)
Definition: Diagnostics.H:135
int getnumbuffers() const
Definition: Diagnostics.H:117
int m_num_buffers
Definition: Diagnostics.H:304
virtual amrex::Real get_snapshot_domain_hi([[maybe_unused]] int i_buffer, [[maybe_unused]] int idim)
Definition: Diagnostics.H:145
void InitBaseData()
Definition: Diagnostics.cpp:457
amrex::Vector< int > m_rho_per_species_index
Definition: Diagnostics.H:306
std::vector< std::string > m_pfield_species
Definition: Diagnostics.H:241
Diagnostics(Diagnostics const &)=delete
amrex::Vector< amrex::Vector< amrex::Geometry > > m_geom_output
Definition: Diagnostics.H:276
void setSnapshotDomainLo(int i_buffer, int idim, amrex::Real domain_lab_lo)
Definition: Diagnostics.H:151
virtual void InitializeParticleBuffer()=0
int nlev_output
Definition: Diagnostics.H:281
amrex::Vector< amrex::Vector< int > > m_totalParticles_in_buffer
Definition: Diagnostics.H:316
virtual amrex::Real get_snapshot_domain_lo([[maybe_unused]] int i_buffer, [[maybe_unused]] int idim)
Definition: Diagnostics.H:140
std::string m_file_prefix
Definition: Diagnostics.H:225
Diagnostics(int i, std::string name)
Definition: Diagnostics.cpp:40
Diagnostics & operator=(Diagnostics &&)=default
void FilterComputePackFlush(int step, bool force_flush=false)
Definition: Diagnostics.cpp:567
bool m_dump_last_timestep
Definition: Diagnostics.H:254
std::vector< int > m_pfield_species_index
Definition: Diagnostics.H:245
virtual bool DoComputeAndPack(int step, bool force_flush=false)=0
virtual bool DoDump(int step, int i_buffer, bool force_flush=false)=0
virtual int get_last_valid_Zslice([[maybe_unused]] int i_buffer)
Definition: Diagnostics.H:170
virtual void Flush(int i_buffer, bool force_flush)=0
Flush particle and field buffers to file using the FlushFormat member variable.
virtual void PrepareParticleDataForOutput()
Definition: Diagnostics.H:215
virtual void InitializeFieldFunctors(int lev)=0
Diagnostics & operator=(Diagnostics const &)=delete
void InitDataBeforeRestart()
Definition: Diagnostics.cpp:298
int nlev
Definition: Diagnostics.H:278
void NewIteration()
Definition: Diagnostics.H:106
std::vector< std::string > m_all_species_names
Definition: Diagnostics.H:285
int m_diag_index
Definition: Diagnostics.H:229
std::vector< std::string > m_pfield_filter_strings
Definition: Diagnostics.H:251
void ComputeAndPack()
Definition: Diagnostics.cpp:522
amrex::Vector< amrex::Vector< std::unique_ptr< ComputeDiagFunctor > > > m_all_field_functors
Definition: Diagnostics.H:295
virtual int get_buffer_k_index_hi([[maybe_unused]] int i_buffer)
Definition: Diagnostics.H:130
std::vector< bool > m_pfield_dofilter
Definition: Diagnostics.H:249
amrex::Vector< amrex::Vector< std::unique_ptr< PinnedMemoryParticleContainer > > > m_particles_buffer
Definition: Diagnostics.H:308
AMREX_GPU_HOST_DEVICE AMREX_FORCE_INLINE void ignore_unused(const Ts &...)
i
Definition: check_interp_points_and_weights.py:174
name
Definition: run_automated.py:229